Changelog

Source: NEWS.md

ameld 0.0

Changes in development

Changes in 0.0.31

• Add confidencebands.
• Add legend argument to plot_surv_roc.

Changes in 0.0.30

• Print confidence intervals in plot_surv_roc legend.
• Plot confidence bands in plot_surv_roc_trend.

Changes in 0.0.29

• Fix upper creatinine bound in meld3.

Changes in 0.0.28

• Add pmeld3.

Changes in 0.0.27

• Add meld3.

Changes in 0.0.26

• Add CITATION file.

Changes in 0.0.25

• Add plot.rcvglmnet(..., what = "path") to plot lambda path (extends glmnet::plot.glmnet).

Changes in 0.0.24

• Pass main argument to .plot.cal, affected function: plot.boot.glmnet.

Changes in 0.0.23

• Add "times" argument to basehaz.

Changes in 0.0.22

• Add basehaz for cv.glmnet class.
• Add legend argument to plot.boot.glmnet.

Changes in 0.0.21

• Fix bootstrap: adapt to exported cutpoint function (error was missing .cutpoint).

Changes in 0.0.20

• Add grouping variable f to bootstrap output.
• Export cutpoints.

Changes in 0.0.19

• Fix ylab position and lty order in legend in plot_surv_roc.
• Add plot_surv_roc_trend.

Changes in 0.0.18

• Return a survival instead of a mortality probability for pmeld_plus7.

Changes in 0.0.17

• Rename meld_plus7 into pmeld_plus7.
• Add pmeld.

Changes in 0.0.16

• Add main to plot.arcv.glmnet.
• Add plot_surv_roc.
• Add rjlegend.

Changes in 0.0.15

• Add .prediction_error, .cutpoints and .cut.
• Add bootstrap and plot.boot.glmnet.
• Add which.min.error.

Changes in 0.0.14

• Add groupmean.

Changes in 0.0.13

• Add arcv.glmnet.
• Integrate rcv.glmnet from https://github.com/ampel-leipzig/glmnettools.
• Use future backend for parallelisation.

Changes in 0.0.12

• Allow vectorized cause argument in meld (again).

Changes in 0.0.11

• Use lower case "type" argument in meld_na (“unos” instead of “UNOS”).
• Restrict meld(..., cause) argument to c("other", "unos", "ethyltoxic", "cholestatic").

Changes in 0.0.10

• Add enum function.

Changes in 0.0.9

• observed_events gains a cumulative argument to calculate cumulative events over time periods.

Changes in 0.0.8

• Rename “calcium, total” and “bilirubin, total” to “total calcium” and “total bilirubin” in eldr$LongDescription

Changes in 0.0.7

• Add observed_vs_expected_mortality.

Changes in 0.0.6

• Add observed_survival, observed_mortality, and observed_events.

Changes in 0.0.5

• Add plot_dots.

Changes in 0.0.4

• Add MELD score calculation: meld, meld_na, meld_plus7
• Add as_metric, as_si to convert between different units.

Changes in 0.0.3

• Add plot_table.

Changes in 0.0.2

• Add plot_surv.
• Increment minimal R dependency to R 4.1.

Changes in 0.0.1

• Initial version with eldd (data) and eldr (reference) dataset.