Last updated: 2022-12-19

Checks: 7 0

Knit directory: ampel-leipzig-meld/

This reproducible R Markdown analysis was created with workflowr (version 1.7.0). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.


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Ignored files:
    Ignored:    _targets/
    Ignored:    analysis/article.md
    Ignored:    container/
    Ignored:    logs/
    Ignored:    scripts/R.sh

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    Untracked:  submission/

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These are the previous versions of the repository in which changes were made to the R Markdown (analysis/pipeline.Rmd) and HTML (docs/pipeline.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
html 9b17f62 Sebastian Gibb 2022-12-19 chore: rebuild site
html c820538 Sebastian Gibb 2022-12-05 chore: rebuild site
html 2877c0f Sebastian Gibb 2022-12-01 chore: rebuild site
html e1e7217 Sebastian Gibb 2022-12-01 fix: missing linebreak
html 88f7b9f Sebastian Gibb 2022-12-01 chore: rebuild site
html 5235082 Sebastian Gibb 2022-11-30 chore: rebuild site
html 1821ea1 Sebastian Gibb 2022-08-10 chore: rebuild site
html 0d43824 Sebastian Gibb 2022-08-09 chore: rebuild site
html afaab45 Sebastian Gibb 2022-08-09 chore: rebuild site
html 1403bda Sebastian Gibb 2022-08-09 chore: rebuild site
html 68ef9aa Sebastian Gibb 2022-07-22 chore: rebuild site
html 83e3c7a Sebastian Gibb 2022-07-19 chore: rebuild site
html f86c368 Sebastian Gibb 2022-07-18 chore: rebuild site
html 65d58c4 Sebastian Gibb 2022-07-18 chore: rebuild site
html 653f778 Sebastian Gibb 2022-07-08 chore: rebuild site
html dcd9153 Sebastian Gibb 2022-07-03 chore: rebuild site
html 9da49ce Sebastian Gibb 2022-06-19 chore: rebuild site
html fb43d01 Sebastian Gibb 2022-06-19 chore: rebuild site
html ebe29cf Sebastian Gibb 2022-06-16 chore: rebuild site
html 8035219 Sebastian Gibb 2022-06-15 chore: rebuild site
html d3e9462 Sebastian Gibb 2022-06-06 chore: rebuild site
html b20484a Sebastian Gibb 2022-06-06 chore: rebuild site
html 983ec69 Sebastian Gibb 2022-03-17 chore: rebuild site
Rmd 19df07c Sebastian Gibb 2022-03-17 feat: add last built title
html 373e7d8 Sebastian Gibb 2021-10-20 chore: rebuild site
html df8964f Sebastian Gibb 2021-10-15 chore: rebuild site
html c66640c Sebastian Gibb 2021-09-14 feat: first nnet tests
html 2b9ab65 Sebastian Gibb 2021-08-07 chore: rebuild site
html afa48d9 Sebastian Gibb 2021-08-07 chore: rebuild site
Rmd 4478f6a Sebastian Gibb 2021-08-02 Revert "fix: working directory for targets"
Rmd cac14f6 Sebastian Gibb 2021-08-02 fix: working directory for targets
Rmd 3957af7 Sebastian Gibb 2021-08-02 refactor: move common yaml headers into _site.yml
html 3aab3e1 Sebastian Gibb 2021-08-01 chore: rebuild site
html 3810a79 Sebastian Gibb 2021-07-15 chore: rebuild site
html 13b68ca Sebastian Gibb 2021-07-04 chore: rebuild site
Rmd 9db8d8f Sebastian Gibb 2021-07-02 feat: add runtime and size to network plot
html 2869556 Sebastian Gibb 2021-07-02 chore: rebuild site
html d9c37ec Sebastian Gibb 2021-07-02 chore: rebuild site
Rmd 17a05ed Sebastian Gibb 2021-07-02 feat: add pipeline page

graph <- targets::tar_visnetwork(
    targets_only = TRUE,
    label = c("time", "size", "branches")
)
graph$x$main$text <- paste0("Last built: ", Sys.time())
graph

sessionInfo()
R version 4.2.0 (2022-04-22)
Platform: x86_64-unknown-linux-gnu (64-bit)

Matrix products: default
BLAS/LAPACK: /gnu/store/ras6dprsw3wm3swk23jjp8ww5dwxj333-openblas-0.3.18/lib/libopenblasp-r0.3.18.so

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.8.3      pillar_1.7.0      compiler_4.2.0    bslib_0.3.1      
 [5] later_1.3.0       jquerylib_0.1.4   git2r_0.30.1      workflowr_1.7.0  
 [9] tools_4.2.0       targets_0.12.1    digest_0.6.29     jsonlite_1.8.0   
[13] evaluate_0.15     lifecycle_1.0.1   tibble_3.1.7      pkgconfig_2.0.3  
[17] rlang_1.0.2       igraph_1.3.1      cli_3.3.0         yaml_2.3.5       
[21] xfun_0.31         fastmap_1.1.0     withr_2.5.0       stringr_1.4.0    
[25] knitr_1.39        htmlwidgets_1.5.4 fs_1.5.2          vctrs_0.4.1      
[29] sass_0.4.1        tidyselect_1.1.2  rprojroot_2.0.3   data.table_1.14.2
[33] glue_1.6.2        R6_2.5.1          processx_3.5.3    fansi_1.0.3      
[37] base64url_1.4     rmarkdown_2.14    bookdown_0.26     purrr_0.3.4      
[41] callr_3.7.0       magrittr_2.0.3    whisker_0.4       codetools_0.2-18 
[45] ps_1.7.0          backports_1.4.1   promises_1.2.0.1  ellipsis_0.3.2   
[49] htmltools_0.5.2   httpuv_1.6.5      utf8_1.2.2        stringi_1.7.6    
[53] visNetwork_2.1.0  crayon_1.5.1